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THE INFORMATION NUCLEUS
Left: Information Nucleus ewes and lambs being mustered for lamb marking at NSW DPI's Cowra Agricultural Research and Advisory Station.
 
The CRC for Sheep Industry Innovation has embarked on an ambitious program of new and continued research aimed at allowing industry to transform wool and meat products and the sheep that produce them. The transformation is to make the wool and meat products more appealing to consumers and the supply chain, and the sheep more profitable to run.
 
A fundamental component of this transformation will be genetic improvement relying on new and improved ways to identify superior animals including through phenotypic measures (what you can directly see and measure) and through genetic (DNA) tests. The Information Nucleus will be the key means to identify, develop and validate these new methods.
 
The Information Nucleus is a world first innovation for sheep that will provide next generation information to industry. It will allow breeders and commercial producers to quickly exploit new technology and molecular information to achieve more rapid genetic improvement in their flocks and across the whole sheep industry. The Information Nucleus will also provide the base for core research activities in other CRC programs and enhance the application of results by industry. The three other CRC research programs are:

The Information Nucleus Program

Introduction
 
With the advent of new and cheaper genetic technologies, the sheep industry is now on the verge of molecular and genetic identification of superior animals.
 
We will soon see the availability of a huge range of genetic markers for research purposes and in coming years commercial and affordable tests will be available for sheep breeders to identify particular characteristics in their sheep without the extended time and costs associated with progeny testing or maintaining a large number of animals until the desired characteristic is expressed, measured and then compared.
 
Right: Milton Curkpatrick, former manager of the Kirby Research Station, University of New England (UNE), Armidale and Professor Geoff Hinch, UNE, with freshly crutched Information Nucleus ewes.
 
Also, our results will increase the accuracy of current Australian Sheep Breeding Values (ASBVs) and assist in developing new ASBVs based on phenotypic measures.
 
To capitalise on the molecular genetic opportunities, the Sheep CRC will be looking to identify a range of traits through genetic markers. Naturally, these include some of the characteristics we already know and measure, such as eye muscle depth, fibre diameter and reproductive performance.
 
In addition, the Sheep CRC research programs aim to improve the ability of wools to deliver predictable next-to-skin comfort and dye-ability, for our meat to come from high yielding carcases with desirable nutritional qualities and for our sheep to be more resistant to parasites and better mothers. So these are the other types of characteristics we expect to be able to identify through new phenotypic or molecular (DNA) tests.
 
The CRC for Sheep Industry Innovation aims to develop appropriate molecular genetic tests that can be used to enhance the current Australian Sheep Breeding Values (ASBVs) as a means to identify the genetic merit of animals.
 
The Information Nucleus is the key means to investigate and develop these tests. The sheep involved in the Information Nucleus will also be used to investigate some management options.
 
There is a close relationship between the CRC for Sheep Industry Innovation, Sheep Genetics and the Sheep Genomics Program (SG) , with the work of each being complementary, not duplicated.
 
It is important to note that this new program will not disseminate genetics and will not be producing or advocating a new breed or type of sheep, rather the tools developed will allow industry and its individual breeders to better pursue the breeding direction that is of value to them and their commercial clients.
 
How will the Information Nucleus help breeders?
Key young sires and some excellent proven older sires from industry flocks are selected annually for progeny testing in the Information Nucleus. Their progeny phenotype information will be included immediately in the Sheep Genetics database and contribute to ASBVs. Their additional progeny will increase the accuracy of the sire ASBVs as well as the accuracy of ASBVs for other related animals, because of the greater across-flock linkages. New traits that prove valuable to industry can be added directly to Sheep Genetics. A major advance will be the validation of markers that will contribute to the development of molecular estimated breeding values. These may be eventually incorporated where appropriate into enhanced ASBVs that can be used to accurately select animals at a very young age and further increase the rate of genetic improvement.
 
What is the Information Nucleus?
The Information Nucleus comprises eights flocks of ewes across Australia, with a total of 5000 ewes, mated to 100 industry sires annually for 5 years to generate a diverse range of phenotypes and massive amounts of genetic information with which to develop new and improved breeding values.
 
Research stations are essential homes for these flocks as the collection of data is labour-intensive and expensive and is disruptive to normal commercial management. Industry is involved as the sires used are chosen from industry.
 
Right: Chris Shands, Senior Livestock Officer, NSW DPI, assessing an Information Nucleus ewe's udder.
 
The Information Nucleus sheep will not just have the meat and wool tests done that we see in modern ram-breeding flocks, but will have more monitoring and more intensive procedures and new tests carried out at more frequent intervals, which require staff with specialist skills and equipment that are not currently mainstream, practical or affordable in the wider industry, but which will ultimately develop tools that are practical and affordable.
 
The research stations where the sub-flocks will be run are:
1. Kirby Research Station, University of New England, Armidale NSW
2a. Trangie Agricultural Research Centre, NSW DPI, Trangie, NSW
2b. Cowra Agricultural Research and Advisory Station, NSW DPI, Cowra, NSW
3a. DPI Hamilton Centre, DPI VIC, Hamilton, VIC
3b. DPI Rutherglen Centre, DPI VIC, Rutherglen, VIC
4a. Struan Research Station, SARDI, Struan, SA
4b. Turretfield Research Station, SARDI, Rosedale, SA
5. Great Southern Agricultural Research Institute, DAFWA, Katanning, WA
 
While there are eight locations, there will be five 'sub-flocks', as the two NSW DPI sites, the two SARDI sites and the two DPI Vic sites are each run as one.
 
These sites represent a range of different environmental conditions across Australia, being particularly important for assessment of the interactions of genetics with the environment.
 
At this stage the flock will be mated five times.
 
What ewes are in the Information Nucleus?
Each of the five sub-flocks comprises approximately 1000 ewes each. The matings represent the major sheep types in the industry and generate Merino (MxM), Border Leicester x Merino (BLxM) and Terminal first- (TxM) and second-cross progeny (TxBLM), see Table1.
 
Table 1. Information Nucleus flock structures 
 
Sires
EwesProgeny Retained femalesSlaughter
40 Merino (M)
2000 M1500 MxM 750 750
20 Border Leicester (BL)
1000 M750 BLxM 375375
40 Terminal (T)
1000 M 750 TxM - 750
 
1000 BLM 750 TxBLM - 750
Total
 5000 3750 1125 2625
   
What sires have been chosen?
Approximately 100 sires are used across the 5000 ewes each year. In successive years a proportion of these sires will have been used in one or more previous years to give the necessary across-year genetic linkages.
See the 2007 sire selection.

See the 2008 sire selection.
 
The sires were chosen by a team comprising experts in genetic analysis, representatives from each of the sites, and Sheep Genetics staff who have a very strong knowledge of the sires and studs that are part of the Sheep Genetics' database.
 
Left: Sarah Bowers, Allstock, artificially inseminating a ewe from the Information Nucleus, at Kirby Research Station, University of New England in 2007.
 
Almost all sires chosen were already recorded in the Sheep Genetics databases (either LAMBPLAN or MERINOSELECT), because such animals bring a wealth of historic data that is linked to a large number of other industry flocks, so adding considerable value to the data to be generated and in return being able to be directly linkable to a wide range of industry flocks. A number of sires from outside the databases were chosen to provide access to some additional bloodlines.
 
Secondly, each individual sire was chosen for particular meat, wool or sheep characteristics, with the sires chosen typically leaders in one or more of these traits.
 
It should be noted that this is neither a breed nor sire evaluation. Certain breeds and sires were chosen in the first year to be broadly representative of industry, but the breeds, numbers and stud origin will vary to ensure diversity, and to generate the range of data required to develop breeding values and tests applicable to wider industry.
 
What will be done with the progeny?
The progeny will be evaluated for phenotypes for a large number of growth, carcase, meat, wool, reproduction and parasite-related traits, with about half of the wethers going for slaughter. The crossbred lambs will be grown out and slaughtered in processing plants with industry partners. Detailed information on carcase and meat traits, meat yield and samples for laboratory testing will be collected. The MxM progeny will be evaluated for a wide range of wool traits and the wethers will be subsequently slaughtered for carcase and meat evaluation. The MxM and BLxM ewes will be retained and mated naturally to evaluate reproduction traits. Blood and tissue samples will also be collected for genotyping and the molecular genetic studies. The first matings of the Information Nucleus occurred in early 2007 so that progeny are available for evaluation in the first year of operation of the CRC for Sheep Industry Innovation. 
 
Above right: Dave Stanley, Senior Technical Officer, Cowra Agricultural and Advisory Station breech scores an Information Nucleus lamb with lamb marking contractor, Chris Chalker. Dave is holding an RFID wand reader to read the lambs' electronic eartags.
 
Information Nucleus site information
 
Kirby Research Station, University of New England, Armidale NSW
General location
About 450 km north of Sydney and 140 km inland from coast (Coffs Harbour), west of the Great Dividing Range.
Latitude Longitude
30.50S 151.66E
Elevation
980 m
Annual Rainfall
790 mm
Pastures
Mixture of native grasses, introduced clovers and developed fescue-based pastures
Soils
Basalt and granite
Climatic classification
Summer rainfall/high rainfall zone
 
Trangie Agricultural Research Centre, NSW DPI, Trangie, NSW
General location
About 400 km NW Sydney, 70 km NW Dubbo, 480 km inland from coast (Taree)
Latitude Longitude
31.99S 147.95E
Elevation
215 m
Annual Rainfall
492 mm
Pastures
Mainly native pastures, with availability of some sown pasture (lucerne) in rotation with cropping. Perennial pastures include windmill grass, spear grass and wallaby grass. Annuals are mainly barley grass, rats-tail fescue, burr medic and crowsfoot.
Soils
Mixed red-brown earths and grey-brown cracking clays
Climatic classification
Uniform (non-seasonal) rainfall/temperate zone. Wheat sheep or dryland cropping zone of central western NSW. Weather district: Central Western Plains.
 
Cowra Agricultural Research and Advisory Station, NSW DPI, Cowra, NSW
General location
About 240 km west of Sydney, in the upper reaches of the Lachlan River in the Central Slopes region of NSW.
Latitude Longitude
33.81S 148.70E
Elevation
381 m
Annual Rainfall
625mm non-seasonal
Pastures
Temperate perennial improved pastures—grasses and sub clover, native pastures and lucerne (winter and summer active).
Soils
Mainly derived from granite and sedimentary rocks (shale, mudstone) but in many cases are colluvium or alluvial and bear little association with adjacent rock types. The predominant soil type is red-brown earth and this has good productivity under sound management.
Climatic classification
Winter rainfall/Sheep-wheat zone Mediterranean climate—warm summers with a mean max. temperature of 30 deg. C; winter max. temperatures reach 13–14 deg. C with frosts between May and September.
 
DPI Hamilton Centre, DPI VIC, Hamilton, VIC
General location
South west Victoria
Latitude Longitude
37.83S 142.06E
Elevation
200 m
Annual Rainfall
680 mm
Pastures
Ryegrass/Phalaris and sub clover
Soils
Clay loams of various textures from gravel loams to silty loams
Climatic classification
Winter rainfall/High rainfall zone
 
DPI Rutherglen Centre, DPI VIC, Rutherglen, VIC
General location
North East Victoria
Latitude Longitude
37.10S  140.79E 
Elevation
175 m
Annual Rainfall
585 mm
Pastures
Annual Ryegrass/Sub clover/Phalaris/Lucerne
Soils
Typically duplex in structure. They have sandy loam surface horizons overlaying medium to heavy clay subsoils. These soils are very acidic in the surface (pH CaCl2 . Classifications include:
Bleached; mottled or sodic yellow Dermosols; Bleached or mottled red or brown Chromosols; Mottled grey or yellow Sodosols; and Yellow Vertisols <4.8; pH water, <5.6) and sodic in the subsoil (exchangeable sodium %>10
Climatic classification
Winter rainfall
 
Turretfield Research Station, SARDI, Rosedale, SA
General location
Turretfield Research Centre is situated at Rosedale, 55 km northeast of Adelaide, in the red-brown earth soil area of South Australia's cereal-livestock zone. The Kingsford property is 4 km to the west.
Latitude Longitude
34.55S 138.83E
Elevation
116 m
Annual Rainfall
468mm.{Growing season Rainfall (May to October) 321 mm}
Pastures
 
Soils
Predominantly loamy red-brown earth soils, with smaller areas of sandy red-brown earth and patches of dark-brown cracking clays over limestone. The red-brown earth soils are slightly acidic to neutral and the dark-brown cracking clays are alkaline.
Climatic classification
Mediterranean-type with hot, dry summers and cold, wet winters
 
Struan Research Station, SARDI, Struan, SA
General location
Approximately 370 km south east of Adelaide and 15 km south of Naracoorte The staff at Struan also oversee the activities at nearby Kybybolite Research Centre which is situated north east of Naracoorte and where there are 307 hectares suitable for cropping, pasture and sheep grazing trials.
Latitude Longitude
37.10'S 140.48'E
Elevation
 
Annual Rainfall
556mm
Pastures
 
Soils
Limestone ridges and 250 hectares of sandy high country and 832 hectares of flood plains (rendzina and podsolised soils overlying limestone). Good supplies of underground water are available at shallow depths (3-4 metres) and approximately 140 hectares are irrigated.
Climatic classification
Mediterranean—hot, dry summers and cool, wet winters.
 
Great Southern Agricultural Research Institute, DAFWA, Katanning, WA 
General location
 
Latitude Longitude
33.69S 117.55E
Elevation
310 m
Annual Rainfall
 
Pastures
 
Soils
 
Climatic classification
Winter rainfall
 
How can you find out more about the Information Nucleus Program?
The Sheep CRC runs Information Nucleus Open Days at the research sites. Find out more about these.
 
A quarterly Information Nucleus News e-newsletter is published (first edition in June 2008). Subscribe to the Information Nucleus e-newsletter.
 
When there are significant events or results, the Sheep CRC will publicise these through the rural media.
 
Presentations about the Information Nucleus will be given at various industry events or dedicated forums in the future. See our events page for Sheep CRC and other industry events.
 
The Information Nucleus brochure  (pdf 3.81 mb) is also available in hard copy; you can obtain these by emailing a request to sheepcrc@sheepcrc.org.au
 
 
Information Nucleus Program Manager:
Associate Professor Julius van der Werf,
University New England, Armidale
02 6773 2092
julius.vanderwerf@une.edu.au
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